[REAL OPT]Default value for [-cpu_frac]   10
[REAL OPT]Default value for [-frame_rate]   10
[INT  OPT]Default value for [-cpu_run_time]  7200
command executed: /Users/rhiju/rosetta++/rosetta.mactelboincgraphics -extract -l temp.1xjr__BOINC_EXCLUDENB_PERMITZERO_FIXAXIS_RNA_ABINITIO-1xjr_-_1809_0.clean.out.list -paths /Users/rhiju/paths.txt -s 1xjr__BOINC_EXCLUDENB_PERMITZERO_FIXAXIS_RNA_ABINITIO-1xjr_-_1809_0.clean.out -enable_dna -enable_rna -fa_input
[T/F  OPT]Default FALSE value for [-no_option_display]
[T/F  OPT]Default FALSE value for [-args_file]
[STR  OPT]New value for [-paths] /Users/rhiju/paths.txt.
[T/F  OPT]Default FALSE value for [-version]
[T/F  OPT]Default FALSE value for [-score]
[T/F  OPT]Default FALSE value for [-abinitio]
[T/F  OPT]Default FALSE value for [-refine]
[T/F  OPT]Default FALSE value for [-assemble]
[T/F  OPT]Default FALSE value for [-idealize]
[T/F  OPT]Default FALSE value for [-relax]
[T/F  OPT]Default FALSE value for [-abrelax]
[T/F  OPT]Default FALSE value for [-abrelax_mode]
[T/F  OPT]Default FALSE value for [-design]
[T/F  OPT]Default FALSE value for [-dock]
[T/F  OPT]Default FALSE value for [-membrane]
[T/F  OPT]Default FALSE value for [-loops]
[T/F  OPT]Default FALSE value for [-pdbstats]
[T/F  OPT]Default FALSE value for [-interface]
[T/F  OPT]Default FALSE value for [-barcode_stats]
[T/F  OPT]Default FALSE value for [-featurize]
[T/F  OPT]Default FALSE value for [-pKa]
[T/F  OPT]Default FALSE value for [-pose_looping]
[T/F  OPT]Default FALSE value for [-domain_insertion]
[T/F  OPT]Default FALSE value for [-antibody_modeler]
[T/F  OPT]Default FALSE value for [-pose1]
[T/F  OPT]Default FALSE value for [-bk_min]
[T/F  OPT]Default FALSE value for [-adna]
[T/F  OPT]Default FALSE value for [-pdna]
[T/F  OPT]Default FALSE value for [-prna]
[T/F  OPT]Default FALSE value for [-jumping]
[T/F  OPT]Default FALSE value for [-pose_abinitio]
[T/F  OPT]Default FALSE value for [-pose_rhiju]
[T/F  OPT]New TRUE value for [-extract]
[T/F  OPT]Default FALSE value for [-jump_relax]
[T/F  OPT]Default FALSE value for [-cst_mode]
[T/F  OPT]Default FALSE value for [-mj_min]
Rosetta mode: pose1
[T/F  OPT]Default FALSE value for [-chain]
[T/F  OPT]Default FALSE value for [-protein]
[T/F  OPT]Default FALSE value for [-series]
[INT  OPT]Default value for [-nstruct]  10
[T/F  OPT]Default FALSE value for [-read_all_chains]
[T/F  OPT]Default FALSE value for [-preserve_header]
[T/F  OPT]Default FALSE value for [-use_pdb_numbering]
[T/F  OPT]Default FALSE value for [-flip_symmetric_sidechains]
[T/F  OPT]New TRUE value for [-fa_input]
[T/F  OPT]Default FALSE value for [-repack]
[T/F  OPT]Default FALSE value for [-no_optH]
[T/F  OPT]Default FALSE value for [-overwrite]
[T/F  OPT]Default FALSE value for [-no_filters]
[T/F  OPT]Default FALSE value for [-output_pdb_gz]
[T/F  OPT]Default FALSE value for [-output_silent_gz]
[T/F  OPT]Default FALSE value for [-output_scorefile_gz]
[T/F  OPT]Default FALSE value for [-pose_silent_out]
[T/F  OPT]Default FALSE value for [-sasapack_bvalues]
[T/F  OPT]Default FALSE value for [-cenlist_values]
[T/F  OPT]Default FALSE value for [-termini]
[T/F  OPT]Default FALSE value for [-Nterminus]
[T/F  OPT]Default FALSE value for [-Cterminus]
[T/F  OPT]Default FALSE value for [-use_trie]
[T/F  OPT]Default FALSE value for [-no_trie]
[T/F  OPT]Default FALSE value for [-use_conformer]
[T/F  OPT]Default FALSE value for [-use_bbind_conformer]
[T/F  OPT]Default FALSE value for [-trials_trie]
[T/F  OPT]Default FALSE value for [-no_trials_trie]
[T/F  OPT]Default FALSE value for [-pose_relax]
[T/F  OPT]Default FALSE value for [-output_interaction_graph_memory_usage]
[T/F  OPT]Default FALSE value for [-read_interaction_graph]
[T/F  OPT]Default FALSE value for [-write_interaction_graph]
[STR  OPT]Default value for [-ig_file] .
[T/F  OPT]Default FALSE value for [-packer_precompute_only]
[T/F  OPT]Default FALSE value for [-tight_memory_restrictions]
[T/F  OPT]Default FALSE value for [-lazy_ig]
[T/F  OPT]Default FALSE value for [-linmem_ig]
[T/F  OPT]Default FALSE value for [-minimalist_ig]
[T/F  OPT]Default FALSE value for [-use_sasa_pack_score]
[T/F  OPT]Default FALSE value for [-output_dot_kinemage]
[T/F  OPT]Default FALSE value for [-pack_low_temp_annealing]
[T/F  OPT]Default FALSE value for [-multi_cool_annealer]
[T/F  OPT]Default FALSE value for [-debug_annealer_design]
[T/F  OPT]Default FALSE value for [-no_his_his_pairE]
[T/F  OPT]Default FALSE value for [-silent_input]
[T/F  OPT]Default FALSE value for [-skip_scorefile_check]
[T/F  OPT]Default FALSE value for [-timer]
[T/F  OPT]Default FALSE value for [-count_attempts]
[T/F  OPT]Default FALSE value for [-status]
[T/F  OPT]Default FALSE value for [-decoy_status]
[T/F  OPT]Default FALSE value for [-ise_movie]
[T/F  OPT]Default FALSE value for [-output_all]
[T/F  OPT]Default FALSE value for [-output_chi_silent]
[T/F  OPT]Default FALSE value for [-accept_all]
[T/F  OPT]Default FALSE value for [-skip_missing_residues]
[T/F  OPT]Default FALSE value for [-use_input_sc]
[T/F  OPT]Default FALSE value for [-use_input_cb]
[STR  OPT]Default value for [-weightfile] none.
[STR  OPT]Default value for [-cst] cst.
[STR  OPT]Default value for [-dpl] dpl.
[STR  OPT]Default value for [-resfile] none.
[STR  OPT]Default value for [-equiv_resfile] none.
[T/F  OPT]Default FALSE value for [-auto_resfile]
[T/F  OPT]Default FALSE value for [-chain_inc]
WARNING:: refold_input T, input_fa T
 refolding of fullatom input not suppported
 setting refold_input F
WARNING:: input_fa T, require_start F
fullatom input not allowed when no starting structures are being input 
setting input_fa F
[T/F  OPT]Default FALSE value for [-full_filename]
[T/F  OPT]Default FALSE value for [-map_sequence]
[INT  OPT]Default value for [-max_frags]  200
[T/F  OPT]Default FALSE value for [-output_centroids]
[STR  OPT]Default value for [-protein_name_prefix] .
[STR  OPT]Default value for [-frags_name_prefix] .
[T/F  OPT]Default FALSE value for [-protein_name_prefix_homolog]
[T/F  OPT]Default FALSE value for [-use_homolog_env_stats]
[T/F  OPT]Default FALSE value for [-use_homolog_pair_stats]
[T/F  OPT]Default FALSE value for [-use_homolog_cendist_stats]
[T/F  OPT]Default FALSE value for [-use_homolog_env_stats_in_farlx]
[T/F  OPT]Default FALSE value for [-use_homolog_pair_stats_in_farlx]
[T/F  OPT]Default FALSE value for [-use_homolog_cendist_stats_in_farlx]
[T/F  OPT]Default FALSE value for [-output_hbond_info]
[T/F  OPT]Default FALSE value for [-monomer_input]
[REAL OPT]Default value for [-vdw_reweight]   1
[REAL OPT]Default value for [-env_reweight]   1
[REAL OPT]Default value for [-pair_reweight]   1
[REAL OPT]Default value for [-cb_reweight]   1
[REAL OPT]Default value for [-sheet_reweight]   1
[REAL OPT]Default value for [-ss_reweight]   1
[REAL OPT]Default value for [-hs_reweight]   1
[REAL OPT]Default value for [-rsigma_reweight]   1
[REAL OPT]Default value for [-rg_reweight]   1
[REAL OPT]Default value for [-pc_reweight]   1
[REAL OPT]Default value for [-fa_atr_reweight]   1
[REAL OPT]Default value for [-fa_rep_reweight]   1
[REAL OPT]Default value for [-fa_dun_reweight ]   1
[REAL OPT]Default value for [-fa_pair_reweight]   1
[REAL OPT]Default value for [-fa_plane_reweight]   1
[REAL OPT]Default value for [-fa_solv_reweight]   1
[REAL OPT]Default value for [-fa_ref_reweight ]   1
[REAL OPT]Default value for [-fa_pH_reweight]   1
[REAL OPT]Default value for [-fa_h2o_reweight]   1
[REAL OPT]Default value for [-fa_prob1b_reweight]   1
[REAL OPT]Default value for [-fa_gb_elec_reweigh]   1
[REAL OPT]Default value for [-hb_srbb_reweight]   1
[REAL OPT]Default value for [-hb_lrbb_reweight]   1
[REAL OPT]Default value for [-hb_sc_reweight]   1
[REAL OPT]Default value for [-chainbreak_reweight]   1
[REAL OPT]Default value for [-electron_density_reweight]   1
[REAL OPT]Default value for [-dummy_model_reweight]   1
[REAL OPT]Default value for [-saxs_model_reweight]   1
[REAL OPT]Default value for [-Wplane_total]   0
[REAL OPT]Default value for [-barcode_reweight]   1
[REAL OPT]Default value for [-barcode_energy_reweight]   1
[T/F  OPT]Default FALSE value for [-fa_max_dis]
[T/F  OPT]Default FALSE value for [-hydrogen_interaction_cutoff]
[T/F  OPT]Default FALSE value for [-find_disulf]
[T/F  OPT]Default FALSE value for [-fix_disulf]
[T/F  OPT]Default FALSE value for [-prna]
[T/F  OPT]New TRUE value for [-enable_dna]
[T/F  OPT]New TRUE value for [-enable_rna]
[T/F  OPT]Default FALSE value for [-dna_interface]
[T/F  OPT]Default FALSE value for [-enable_ligand_aa]
[T/F  OPT]Default FALSE value for [-phospho_ser]
[T/F  OPT]Default FALSE value for [-surface]
[T/F  OPT]Default FALSE value for [-loops]
[T/F  OPT]Default FALSE value for [-taboo]
[T/F  OPT]Default FALSE value for [-vary_omega]
[T/F  OPT]Default FALSE value for [-fine_hb_categories]
[T/F  OPT]Default FALSE value for [-geometric_sol]
[T/F  OPT]Default FALSE value for [-multi_chain]
[T/F  OPT]Default FALSE value for [-ex1]
[T/F  OPT]Default FALSE value for [-ex2]
[T/F  OPT]Default FALSE value for [-ex3]
[T/F  OPT]Default FALSE value for [-ex4]
[T/F  OPT]Default FALSE value for [-ex1aro]
[T/F  OPT]Default FALSE value for [-ex1aro_half]
[T/F  OPT]Default FALSE value for [-ex2aro_only]
[T/F  OPT]Default FALSE value for [-ex1aro_exposed]
[T/F  OPT]Default FALSE value for [-ex2aro_exposed]
[T/F  OPT]Default FALSE value for [-exOH]
[INT  OPT]Default value for [-extrachi_cutoff]  18
[T/F  OPT]Default FALSE value for [-rot_pert]
[T/F  OPT]Default FALSE value for [-rot_pert_input]
[T/F  OPT]Default FALSE value for [-exdb]
[T/F  OPT]Default FALSE value for [-use_electrostatic_repulsion]
[T/F  OPT]Default FALSE value for [-explicit_h2o]
[T/F  OPT]Default FALSE value for [-solvate]
[T/F  OPT]Default FALSE value for [-pH]
[T/F  OPT]Default FALSE value for [-try_both_his_tautomers]
[T/F  OPT]Default FALSE value for [-hydrate_dna]
[T/F  OPT]Default FALSE value for [-ex_dna_waters]
[T/F  OPT]Default FALSE value for [-minimize_rot]
[T/F  OPT]Default FALSE value for [-read_hetero_h2o]
[T/F  OPT]Default FALSE value for [-Wint_score_only]
[T/F  OPT]Default FALSE value for [-Wint_repack_only]
[T/F  OPT]Default FALSE value for [-ligand]
[T/F  OPT]Default FALSE value for [-enzyme_design]
[T/F  OPT]Default FALSE value for [-score_contact_flag]
[T/F  OPT]Default FALSE value for [-score_contact_weight]
[T/F  OPT]Default FALSE value for [-score_contact_threshold]
[T/F  OPT]Default FALSE value for [-scorefxn]
default centroid scorefxn:  4
default fullatom scorefxn:  12
[INT  OPT]Default value for [-run_level]  0
[T/F  OPT]Default FALSE value for [-silent]
[T/F  OPT]Default FALSE value for [-output_silent_gz]
[T/F  OPT]Default FALSE value for [-verbose]
[T/F  OPT]Default FALSE value for [-gush]
[T/F  OPT]Default FALSE value for [-yap]
[T/F  OPT]Default FALSE value for [-chat]
[T/F  OPT]Default FALSE value for [-inform]
[T/F  OPT]Default FALSE value for [-quiet]
run level:  0
[T/F  OPT]Default FALSE value for [-benchmark]
[T/F  OPT]Default FALSE value for [-debug]
[INT  OPT]Default value for [-sym_des_units]  1
[T/F  OPT]Default FALSE value for [-mj_min]
[REAL OPT]Default value for [-mod_hhrep_height]   1
[REAL OPT]Default value for [-mod_hhrep_width]   1
[REAL OPT]Default value for [-mod_hhrep_center]   2.79999995
[REAL OPT]Default value for [-mod_hhrep_exponent]   4
[REAL OPT]Default value for [-smooth_etable_ljweight]   1.15999997
[REAL OPT]Default value for [-smooth_etable_solvweight]   1.5
[STR  OPT]New value for [-s] 1xjr__BOINC_EXCLUDENB_PERMITZERO_FIXAXIS_RNA_ABINITIO-1xjr_-_1809_0.clean.out.
Starting structure: 1xjr__BOINC_EXCLUDENB_PERMITZERO_FIXAXIS_RNA_ABINITIO-1xjr_-_1809_0.clean.out
Reading /users/rhiju/rosetta_database/Rama_smooth_dyn.dat_ss_6.4
[STR  OPT]Default value for [-description_file] rosetta_description.txt.
Reading /users/rhiju/rosetta_database/phi.theta.36.HS.resmooth
Reading /users/rhiju/rosetta_database/phi.theta.36.SS.resmooth
[STR  OPT]Default value for [-atom_vdw_set] default.
[T/F  OPT]Default FALSE value for [-IUPAC]
Atom_mode set to all
Reading /users/rhiju/rosetta_database/paircutoffs
[T/F  OPT]Default FALSE value for [-interface_ds]
[T/F  OPT]Default FALSE value for [-decoystats]
set_decoystats_flag: from,to F F
[T/F  OPT]Default FALSE value for [-decoyfeatures]
[T/F  OPT]Default FALSE value for [-t32s3]
[T/F  OPT]Default FALSE value for [-evolution]
[T/F  OPT]Default FALSE value for [-evol_recomb]
[T/F  OPT]Default FALSE value for [-profile]
BOINC :: [2007- 7- 2 12: 0:39:] :: mode: pose1 :: nstartnum: 1 :: number_of_output: 10 :: num_decoys: 0 :: pct_complete: 0
[T/F  OPT]Default FALSE value for [-watchdog]
[T/F  OPT]Default FALSE value for [-pose_benchmark]
[T/F  OPT]Default FALSE value for [-pose_barcode_stats]
[T/F  OPT]Default FALSE value for [-bk_min]
[T/F  OPT]Default FALSE value for [-jumping]
[T/F  OPT]Default FALSE value for [-pose_abinitio]
[T/F  OPT]Default FALSE value for [-electron_density_score]
[T/F  OPT]New TRUE value for [-extract]
[T/F  OPT]New TRUE value for [-fa_input]
[T/F  OPT]New TRUE value for [-s]
[STR  OPT]New value for [-s] 1xjr__BOINC_EXCLUDENB_PERMITZERO_FIXAXIS_RNA_ABINITIO-1xjr_-_1809_0.clean.out.
[STR  OPT]Default value for [-start_pdb] dummy.
read structure S_00007_0002460_0 500
read structure S_00011_0003191_0 1000
[T/F  OPT]Default FALSE value for [-t]
[T/F  OPT]Default FALSE value for [-all]
[T/F  OPT]New TRUE value for [-l]
[T/F  OPT]New TRUE value for [-l]
[STR  OPT]New value for [-l] temp.1xjr__BOINC_EXCLUDENB_PERMITZERO_FIXAXIS_RNA_ABINITIO-1xjr_-_1809_0.clean.out.list.
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
initializing full atom functions
[T/F  OPT]Default FALSE value for [-soft_rep]
[T/F  OPT]Default FALSE value for [-soft_rep_design]
[T/F  OPT]Default FALSE value for [-use_aw]
[T/F  OPT]Default FALSE value for [-use_bw]
[T/F  OPT]Default FALSE value for [-use_packing_etables_always]
[T/F  OPT]Default FALSE value for [-smooth_etable]
[T/F  OPT]Default FALSE value for [-reduce_templates]
[T/F  OPT]Default FALSE value for [-gen_born]
[T/F  OPT]Default FALSE value for [-small_radii]
[STR  OPT]Default value for [-fa_lj_rep_slope] highres.
[T/F  OPT]Default FALSE value for [-dna_weights]
Starting energy table calculation
Energy table parameter set: polh_aroh  Revision: 14003 Date: 2007-04-06 11:24:40 -0700 (Fri, 06 Apr 2007)
[T/F  OPT]Default FALSE value for [-mod_hhrep]
Finished calculating energy tables.
[T/F  OPT]Default FALSE value for [-mod_etable]
[T/F  OPT]Default FALSE value for [-input_etables]
[T/F  OPT]Default FALSE value for [-output_etables]
WARNING! WARNING! Skipping bbdep, avgE, table readin.
[T/F  OPT]Default FALSE value for [-new_centroid_packing]
[REAL OPT]Default value for [-centroid_pack_weight]   2
[T/F  OPT]Default FALSE value for [-separate_centroid_pack_score]
[REAL OPT]Default value for [-cb_weight]   1
[REAL OPT]Default value for [-localstrandpair_penalty]   0
[REAL OPT]Default value for [-rsd_wt_helix]   1
[REAL OPT]Default value for [-rsd_wt_loop]   1
[REAL OPT]Default value for [-rsd_wt_strand]   1
[REAL OPT]Default value for [-strand_dist_cutoff]   6.5
[T/F  OPT]Default FALSE value for [-stretch_strand_dist_cutoff]
[REAL OPT]Default value for [-seq_sep_scale]   20
[REAL OPT]Default value for [-max_strand_dist_cutoff]   12
[T/F  OPT]Default FALSE value for [-ignore_sspair_barcode_in_score]
[T/F  OPT]Default FALSE value for [-handedness_score]
Pose::dump_pdb: .//S_00029_0001844_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0003593_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00015_0003125_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0001691_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0002504_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0003865_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0001893_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0000842_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0004377_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0004844_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0004698_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0000170_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0001919_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0001560_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0002017_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0000696_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0003614_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0004736_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0001707_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00018_0004309_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0000944_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0001153_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0000673_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0002804_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0004853_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0003152_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0004640_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00018_0000178_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00023_0002833_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0002073_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0000028_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0004844_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00010_0000120_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0002389_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0000562_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00011_0001029_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0003236_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0002592_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0001767_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0002941_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0002458_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00013_0004811_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0001366_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0002666_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00013_0003978_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0002753_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0001252_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0004732_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0003286_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0003477_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0000504_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0004667_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0000935_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0003258_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0001885_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0003637_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0004304_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0000718_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0002069_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0003222_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0003603_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0001391_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0001383_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0002869_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0000675_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0001287_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0000433_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0000466_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0001683_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0003907_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0000025_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0001472_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0002490_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0003164_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0003798_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0003640_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0004507_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0000099_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0004093_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0004326_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0003498_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0000736_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0003227_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0000486_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0002255_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00015_0004007_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00010_0000444_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0002295_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0000501_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0000556_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0003207_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0004114_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0004246_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0003525_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00010_0003266_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0000627_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0001416_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0000385_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00012_0003676_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0004779_1.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0004901_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00023_0001306_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0001085_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0002190_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0001893_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00015_0001745_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0003178_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0000494_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0000642_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00014_0001767_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0002676_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0000879_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0000570_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00017_0001844_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0003220_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0000105_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0004351_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0003673_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00013_0002399_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0001216_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00013_0001897_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0000312_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0000680_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0000426_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0003217_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00013_0002713_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0004226_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0003727_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0004820_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0001437_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0001536_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0004794_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00012_0004174_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0004980_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0002201_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00011_0003590_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0000640_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0002068_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0000301_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0001413_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0001740_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0002035_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0000641_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0003071_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00013_0003152_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0001279_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0000794_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00014_0003110_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0001785_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0004720_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0003117_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0000529_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00012_0000003_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0001550_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0002925_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0004217_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0002881_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0000206_1.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0004479_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0003333_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0000877_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0000248_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0002936_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0002300_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0002348_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0003596_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0001498_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0004389_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0004235_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0003552_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00026_0003734_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0001351_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0000972_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00015_0001844_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0001108_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0003951_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0000540_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0004994_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0002591_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00016_0002934_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0004200_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0002970_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0000509_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0002627_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00010_0001504_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0003523_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0001890_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0004775_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0000300_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0000356_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0004230_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0003167_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0002780_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0000476_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0000258_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0001709_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00014_0000886_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0002936_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0002655_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0004443_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00010_0000001_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0003882_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0000496_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00013_0004893_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00016_0004618_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0003330_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0001390_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0003946_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0000944_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0003958_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0004012_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0001623_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0004277_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0001851_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0001139_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0004324_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00014_0000300_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0000079_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0000519_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0000665_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00011_0000950_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0000402_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00023_0004416_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0000602_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00011_0000556_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0002438_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0000918_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0000362_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00021_0003007_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0003040_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0002901_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0001378_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0003697_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0001442_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0002894_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0000236_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0002815_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0002411_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0002783_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0002362_1.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0003819_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0000953_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0002037_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0001368_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0003674_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0000809_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0004906_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0003657_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0004232_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00011_0000132_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0001784_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0000349_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0001544_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0002048_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00014_0000877_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0000403_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0001024_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0003309_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0004037_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0000622_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0004755_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0002059_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0002028_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0000578_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00011_0004226_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0000996_1.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0000760_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0004451_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0000944_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0002757_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0002609_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0002845_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0004526_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0000028_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0003270_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0003244_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00012_0001696_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00010_0003147_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0002859_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0003270_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0001705_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0003946_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0001472_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0002883_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0004651_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0003640_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0003051_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0004430_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0004850_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00017_0001256_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0003557_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0003733_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0000111_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0001820_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00019_0002318_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0004097_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0002054_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0004771_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00017_0004772_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0002533_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0004464_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0001638_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0000453_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0002045_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0004485_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0000001_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0004167_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0002841_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0002975_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0001356_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0002809_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0003654_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0002147_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00018_0002502_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0000723_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0000379_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0000090_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0000230_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0000934_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0004099_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00012_0000056_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0000383_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0000519_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0002211_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0000143_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0004397_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0004250_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00011_0001785_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0004400_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0002793_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0000125_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0001082_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00019_0000288_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0003249_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0001084_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0002661_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0004129_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0001375_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00014_0002444_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0003291_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0000711_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0004157_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00026_0001844_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0000108_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0004946_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0001719_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0004225_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0003607_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0002774_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0003857_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0001768_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0000738_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0004678_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0004244_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0000272_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0004175_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0001360_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00010_0000168_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0000335_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00010_0002470_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0000080_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0003842_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0004816_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0001889_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0001707_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0003090_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0003112_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0000921_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0000209_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0003452_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0000252_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0002337_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0003408_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0004926_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0002710_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0003110_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00024_0003402_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0002146_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0000792_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0004206_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0002444_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0003410_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0004632_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00010_0002806_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0004105_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0004165_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0004618_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0002543_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0004908_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0004648_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0003721_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00012_0000620_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00010_0001378_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00011_0002683_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0003872_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0004485_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0003105_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0000290_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0000370_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00010_0003199_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0002167_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0001474_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0004428_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0001720_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0003597_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0004017_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00025_0003734_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00010_0001634_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0000699_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0004825_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0004889_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0002317_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0000141_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00016_0004496_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0003703_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0004336_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00013_0003291_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0002934_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0001939_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00015_0001402_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0003730_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0001697_1.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0002513_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0001237_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0004269_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0004684_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0003658_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0003329_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0004323_1.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0004689_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0001271_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0002535_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0003048_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0002271_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0003865_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00011_0002549_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0001486_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0002683_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0004781_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00026_0003191_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0001162_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0000284_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0001153_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0003154_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00013_0003946_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0002591_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0000990_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0003606_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0004510_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0004173_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0003109_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0000845_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0004476_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0003254_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0001317_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0003338_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0001810_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00013_0001034_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0004260_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0000356_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0001677_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0003474_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00011_0004779_1.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0001356_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0004691_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0001137_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00010_0004700_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0004376_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0002320_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0000029_1.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0003500_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0003304_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0004777_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0004918_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0004310_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00010_0000949_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0000561_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0000334_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00011_0004194_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0001844_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0002376_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0003031_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0001519_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0001554_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0001073_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0000548_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0001469_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0001694_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0002396_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0003193_1.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00013_0002504_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0001534_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0001848_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0004661_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0002655_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0002994_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0004438_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0004146_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0003024_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0001801_0.pdb
======================================================
DONE ::     1 starting structures  29.6464 cpu seconds
This process generated      0 decoys from       0 attempts
======================================================
[REAL OPT]Default value for [-cpu_frac]   10
[REAL OPT]Default value for [-frame_rate]   10
[INT  OPT]Default value for [-cpu_run_time]  7200
command executed: /Users/rhiju/rosetta++/rosetta.mactelboincgraphics -extract -l temp.1xjr__BOINC_EXCLUDENB_PERMITZERO_FIXAXIS_RNA_ABINITIO-1xjr_-_1809_0.rms.clean.out.list -paths /Users/rhiju/paths.txt -s 1xjr__BOINC_EXCLUDENB_PERMITZERO_FIXAXIS_RNA_ABINITIO-1xjr_-_1809_0.rms.clean.out -enable_dna -enable_rna -fa_input
[T/F  OPT]Default FALSE value for [-no_option_display]
[T/F  OPT]Default FALSE value for [-args_file]
[STR  OPT]New value for [-paths] /Users/rhiju/paths.txt.
[T/F  OPT]Default FALSE value for [-version]
[T/F  OPT]Default FALSE value for [-score]
[T/F  OPT]Default FALSE value for [-abinitio]
[T/F  OPT]Default FALSE value for [-refine]
[T/F  OPT]Default FALSE value for [-assemble]
[T/F  OPT]Default FALSE value for [-idealize]
[T/F  OPT]Default FALSE value for [-relax]
[T/F  OPT]Default FALSE value for [-abrelax]
[T/F  OPT]Default FALSE value for [-abrelax_mode]
[T/F  OPT]Default FALSE value for [-design]
[T/F  OPT]Default FALSE value for [-dock]
[T/F  OPT]Default FALSE value for [-membrane]
[T/F  OPT]Default FALSE value for [-loops]
[T/F  OPT]Default FALSE value for [-pdbstats]
[T/F  OPT]Default FALSE value for [-interface]
[T/F  OPT]Default FALSE value for [-barcode_stats]
[T/F  OPT]Default FALSE value for [-featurize]
[T/F  OPT]Default FALSE value for [-pKa]
[T/F  OPT]Default FALSE value for [-pose_looping]
[T/F  OPT]Default FALSE value for [-domain_insertion]
[T/F  OPT]Default FALSE value for [-antibody_modeler]
[T/F  OPT]Default FALSE value for [-pose1]
[T/F  OPT]Default FALSE value for [-bk_min]
[T/F  OPT]Default FALSE value for [-adna]
[T/F  OPT]Default FALSE value for [-pdna]
[T/F  OPT]Default FALSE value for [-prna]
[T/F  OPT]Default FALSE value for [-jumping]
[T/F  OPT]Default FALSE value for [-pose_abinitio]
[T/F  OPT]Default FALSE value for [-pose_rhiju]
[T/F  OPT]New TRUE value for [-extract]
[T/F  OPT]Default FALSE value for [-jump_relax]
[T/F  OPT]Default FALSE value for [-cst_mode]
[T/F  OPT]Default FALSE value for [-mj_min]
Rosetta mode: pose1
[T/F  OPT]Default FALSE value for [-chain]
[T/F  OPT]Default FALSE value for [-protein]
[T/F  OPT]Default FALSE value for [-series]
[INT  OPT]Default value for [-nstruct]  10
[T/F  OPT]Default FALSE value for [-read_all_chains]
[T/F  OPT]Default FALSE value for [-preserve_header]
[T/F  OPT]Default FALSE value for [-use_pdb_numbering]
[T/F  OPT]Default FALSE value for [-flip_symmetric_sidechains]
[T/F  OPT]New TRUE value for [-fa_input]
[T/F  OPT]Default FALSE value for [-repack]
[T/F  OPT]Default FALSE value for [-no_optH]
[T/F  OPT]Default FALSE value for [-overwrite]
[T/F  OPT]Default FALSE value for [-no_filters]
[T/F  OPT]Default FALSE value for [-output_pdb_gz]
[T/F  OPT]Default FALSE value for [-output_silent_gz]
[T/F  OPT]Default FALSE value for [-output_scorefile_gz]
[T/F  OPT]Default FALSE value for [-pose_silent_out]
[T/F  OPT]Default FALSE value for [-sasapack_bvalues]
[T/F  OPT]Default FALSE value for [-cenlist_values]
[T/F  OPT]Default FALSE value for [-termini]
[T/F  OPT]Default FALSE value for [-Nterminus]
[T/F  OPT]Default FALSE value for [-Cterminus]
[T/F  OPT]Default FALSE value for [-use_trie]
[T/F  OPT]Default FALSE value for [-no_trie]
[T/F  OPT]Default FALSE value for [-use_conformer]
[T/F  OPT]Default FALSE value for [-use_bbind_conformer]
[T/F  OPT]Default FALSE value for [-trials_trie]
[T/F  OPT]Default FALSE value for [-no_trials_trie]
[T/F  OPT]Default FALSE value for [-pose_relax]
[T/F  OPT]Default FALSE value for [-output_interaction_graph_memory_usage]
[T/F  OPT]Default FALSE value for [-read_interaction_graph]
[T/F  OPT]Default FALSE value for [-write_interaction_graph]
[STR  OPT]Default value for [-ig_file] .
[T/F  OPT]Default FALSE value for [-packer_precompute_only]
[T/F  OPT]Default FALSE value for [-tight_memory_restrictions]
[T/F  OPT]Default FALSE value for [-lazy_ig]
[T/F  OPT]Default FALSE value for [-linmem_ig]
[T/F  OPT]Default FALSE value for [-minimalist_ig]
[T/F  OPT]Default FALSE value for [-use_sasa_pack_score]
[T/F  OPT]Default FALSE value for [-output_dot_kinemage]
[T/F  OPT]Default FALSE value for [-pack_low_temp_annealing]
[T/F  OPT]Default FALSE value for [-multi_cool_annealer]
[T/F  OPT]Default FALSE value for [-debug_annealer_design]
[T/F  OPT]Default FALSE value for [-no_his_his_pairE]
[T/F  OPT]Default FALSE value for [-silent_input]
[T/F  OPT]Default FALSE value for [-skip_scorefile_check]
[T/F  OPT]Default FALSE value for [-timer]
[T/F  OPT]Default FALSE value for [-count_attempts]
[T/F  OPT]Default FALSE value for [-status]
[T/F  OPT]Default FALSE value for [-decoy_status]
[T/F  OPT]Default FALSE value for [-ise_movie]
[T/F  OPT]Default FALSE value for [-output_all]
[T/F  OPT]Default FALSE value for [-output_chi_silent]
[T/F  OPT]Default FALSE value for [-accept_all]
[T/F  OPT]Default FALSE value for [-skip_missing_residues]
[T/F  OPT]Default FALSE value for [-use_input_sc]
[T/F  OPT]Default FALSE value for [-use_input_cb]
[STR  OPT]Default value for [-weightfile] none.
[STR  OPT]Default value for [-cst] cst.
[STR  OPT]Default value for [-dpl] dpl.
[STR  OPT]Default value for [-resfile] none.
[STR  OPT]Default value for [-equiv_resfile] none.
[T/F  OPT]Default FALSE value for [-auto_resfile]
[T/F  OPT]Default FALSE value for [-chain_inc]
WARNING:: refold_input T, input_fa T
 refolding of fullatom input not suppported
 setting refold_input F
WARNING:: input_fa T, require_start F
fullatom input not allowed when no starting structures are being input 
setting input_fa F
[T/F  OPT]Default FALSE value for [-full_filename]
[T/F  OPT]Default FALSE value for [-map_sequence]
[INT  OPT]Default value for [-max_frags]  200
[T/F  OPT]Default FALSE value for [-output_centroids]
[STR  OPT]Default value for [-protein_name_prefix] .
[STR  OPT]Default value for [-frags_name_prefix] .
[T/F  OPT]Default FALSE value for [-protein_name_prefix_homolog]
[T/F  OPT]Default FALSE value for [-use_homolog_env_stats]
[T/F  OPT]Default FALSE value for [-use_homolog_pair_stats]
[T/F  OPT]Default FALSE value for [-use_homolog_cendist_stats]
[T/F  OPT]Default FALSE value for [-use_homolog_env_stats_in_farlx]
[T/F  OPT]Default FALSE value for [-use_homolog_pair_stats_in_farlx]
[T/F  OPT]Default FALSE value for [-use_homolog_cendist_stats_in_farlx]
[T/F  OPT]Default FALSE value for [-output_hbond_info]
[T/F  OPT]Default FALSE value for [-monomer_input]
[REAL OPT]Default value for [-vdw_reweight]   1
[REAL OPT]Default value for [-env_reweight]   1
[REAL OPT]Default value for [-pair_reweight]   1
[REAL OPT]Default value for [-cb_reweight]   1
[REAL OPT]Default value for [-sheet_reweight]   1
[REAL OPT]Default value for [-ss_reweight]   1
[REAL OPT]Default value for [-hs_reweight]   1
[REAL OPT]Default value for [-rsigma_reweight]   1
[REAL OPT]Default value for [-rg_reweight]   1
[REAL OPT]Default value for [-pc_reweight]   1
[REAL OPT]Default value for [-fa_atr_reweight]   1
[REAL OPT]Default value for [-fa_rep_reweight]   1
[REAL OPT]Default value for [-fa_dun_reweight ]   1
[REAL OPT]Default value for [-fa_pair_reweight]   1
[REAL OPT]Default value for [-fa_plane_reweight]   1
[REAL OPT]Default value for [-fa_solv_reweight]   1
[REAL OPT]Default value for [-fa_ref_reweight ]   1
[REAL OPT]Default value for [-fa_pH_reweight]   1
[REAL OPT]Default value for [-fa_h2o_reweight]   1
[REAL OPT]Default value for [-fa_prob1b_reweight]   1
[REAL OPT]Default value for [-fa_gb_elec_reweigh]   1
[REAL OPT]Default value for [-hb_srbb_reweight]   1
[REAL OPT]Default value for [-hb_lrbb_reweight]   1
[REAL OPT]Default value for [-hb_sc_reweight]   1
[REAL OPT]Default value for [-chainbreak_reweight]   1
[REAL OPT]Default value for [-electron_density_reweight]   1
[REAL OPT]Default value for [-dummy_model_reweight]   1
[REAL OPT]Default value for [-saxs_model_reweight]   1
[REAL OPT]Default value for [-Wplane_total]   0
[REAL OPT]Default value for [-barcode_reweight]   1
[REAL OPT]Default value for [-barcode_energy_reweight]   1
[T/F  OPT]Default FALSE value for [-fa_max_dis]
[T/F  OPT]Default FALSE value for [-hydrogen_interaction_cutoff]
[T/F  OPT]Default FALSE value for [-find_disulf]
[T/F  OPT]Default FALSE value for [-fix_disulf]
[T/F  OPT]Default FALSE value for [-prna]
[T/F  OPT]New TRUE value for [-enable_dna]
[T/F  OPT]New TRUE value for [-enable_rna]
[T/F  OPT]Default FALSE value for [-dna_interface]
[T/F  OPT]Default FALSE value for [-enable_ligand_aa]
[T/F  OPT]Default FALSE value for [-phospho_ser]
[T/F  OPT]Default FALSE value for [-surface]
[T/F  OPT]Default FALSE value for [-loops]
[T/F  OPT]Default FALSE value for [-taboo]
[T/F  OPT]Default FALSE value for [-vary_omega]
[T/F  OPT]Default FALSE value for [-fine_hb_categories]
[T/F  OPT]Default FALSE value for [-geometric_sol]
[T/F  OPT]Default FALSE value for [-multi_chain]
[T/F  OPT]Default FALSE value for [-ex1]
[T/F  OPT]Default FALSE value for [-ex2]
[T/F  OPT]Default FALSE value for [-ex3]
[T/F  OPT]Default FALSE value for [-ex4]
[T/F  OPT]Default FALSE value for [-ex1aro]
[T/F  OPT]Default FALSE value for [-ex1aro_half]
[T/F  OPT]Default FALSE value for [-ex2aro_only]
[T/F  OPT]Default FALSE value for [-ex1aro_exposed]
[T/F  OPT]Default FALSE value for [-ex2aro_exposed]
[T/F  OPT]Default FALSE value for [-exOH]
[INT  OPT]Default value for [-extrachi_cutoff]  18
[T/F  OPT]Default FALSE value for [-rot_pert]
[T/F  OPT]Default FALSE value for [-rot_pert_input]
[T/F  OPT]Default FALSE value for [-exdb]
[T/F  OPT]Default FALSE value for [-use_electrostatic_repulsion]
[T/F  OPT]Default FALSE value for [-explicit_h2o]
[T/F  OPT]Default FALSE value for [-solvate]
[T/F  OPT]Default FALSE value for [-pH]
[T/F  OPT]Default FALSE value for [-try_both_his_tautomers]
[T/F  OPT]Default FALSE value for [-hydrate_dna]
[T/F  OPT]Default FALSE value for [-ex_dna_waters]
[T/F  OPT]Default FALSE value for [-minimize_rot]
[T/F  OPT]Default FALSE value for [-read_hetero_h2o]
[T/F  OPT]Default FALSE value for [-Wint_score_only]
[T/F  OPT]Default FALSE value for [-Wint_repack_only]
[T/F  OPT]Default FALSE value for [-ligand]
[T/F  OPT]Default FALSE value for [-enzyme_design]
[T/F  OPT]Default FALSE value for [-score_contact_flag]
[T/F  OPT]Default FALSE value for [-score_contact_weight]
[T/F  OPT]Default FALSE value for [-score_contact_threshold]
[T/F  OPT]Default FALSE value for [-scorefxn]
default centroid scorefxn:  4
default fullatom scorefxn:  12
[INT  OPT]Default value for [-run_level]  0
[T/F  OPT]Default FALSE value for [-silent]
[T/F  OPT]Default FALSE value for [-output_silent_gz]
[T/F  OPT]Default FALSE value for [-verbose]
[T/F  OPT]Default FALSE value for [-gush]
[T/F  OPT]Default FALSE value for [-yap]
[T/F  OPT]Default FALSE value for [-chat]
[T/F  OPT]Default FALSE value for [-inform]
[T/F  OPT]Default FALSE value for [-quiet]
run level:  0
[T/F  OPT]Default FALSE value for [-benchmark]
[T/F  OPT]Default FALSE value for [-debug]
[INT  OPT]Default value for [-sym_des_units]  1
[T/F  OPT]Default FALSE value for [-mj_min]
[REAL OPT]Default value for [-mod_hhrep_height]   1
[REAL OPT]Default value for [-mod_hhrep_width]   1
[REAL OPT]Default value for [-mod_hhrep_center]   2.79999995
[REAL OPT]Default value for [-mod_hhrep_exponent]   4
[REAL OPT]Default value for [-smooth_etable_ljweight]   1.15999997
[REAL OPT]Default value for [-smooth_etable_solvweight]   1.5
[STR  OPT]New value for [-s] 1xjr__BOINC_EXCLUDENB_PERMITZERO_FIXAXIS_RNA_ABINITIO-1xjr_-_1809_0.rms.clean.out.
Starting structure: 1xjr__BOINC_EXCLUDENB_PERMITZERO_FIXAXIS_RNA_ABINITIO-1xjr_-_1809_0.rms.clean.out
Reading /users/rhiju/rosetta_database/Rama_smooth_dyn.dat_ss_6.4
[STR  OPT]Default value for [-description_file] rosetta_description.txt.
Reading /users/rhiju/rosetta_database/phi.theta.36.HS.resmooth
Reading /users/rhiju/rosetta_database/phi.theta.36.SS.resmooth
[STR  OPT]Default value for [-atom_vdw_set] default.
[T/F  OPT]Default FALSE value for [-IUPAC]
Atom_mode set to all
Reading /users/rhiju/rosetta_database/paircutoffs
[T/F  OPT]Default FALSE value for [-interface_ds]
[T/F  OPT]Default FALSE value for [-decoystats]
set_decoystats_flag: from,to F F
[T/F  OPT]Default FALSE value for [-decoyfeatures]
[T/F  OPT]Default FALSE value for [-t32s3]
[T/F  OPT]Default FALSE value for [-evolution]
[T/F  OPT]Default FALSE value for [-evol_recomb]
[T/F  OPT]Default FALSE value for [-profile]
BOINC :: [2007- 7- 2 12: 1:10:] :: mode: pose1 :: nstartnum: 1 :: number_of_output: 10 :: num_decoys: 0 :: pct_complete: 0
[T/F  OPT]Default FALSE value for [-watchdog]
[T/F  OPT]Default FALSE value for [-pose_benchmark]
[T/F  OPT]Default FALSE value for [-pose_barcode_stats]
[T/F  OPT]Default FALSE value for [-bk_min]
[T/F  OPT]Default FALSE value for [-jumping]
[T/F  OPT]Default FALSE value for [-pose_abinitio]
[T/F  OPT]Default FALSE value for [-electron_density_score]
[T/F  OPT]New TRUE value for [-extract]
[T/F  OPT]New TRUE value for [-fa_input]
[T/F  OPT]New TRUE value for [-s]
[STR  OPT]New value for [-s] 1xjr__BOINC_EXCLUDENB_PERMITZERO_FIXAXIS_RNA_ABINITIO-1xjr_-_1809_0.rms.clean.out.
[STR  OPT]Default value for [-start_pdb] dummy.
[T/F  OPT]Default FALSE value for [-t]
[T/F  OPT]Default FALSE value for [-all]
[T/F  OPT]New TRUE value for [-l]
[T/F  OPT]New TRUE value for [-l]
[STR  OPT]New value for [-l] temp.1xjr__BOINC_EXCLUDENB_PERMITZERO_FIXAXIS_RNA_ABINITIO-1xjr_-_1809_0.rms.clean.out.list.
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
initializing full atom functions
[T/F  OPT]Default FALSE value for [-soft_rep]
[T/F  OPT]Default FALSE value for [-soft_rep_design]
[T/F  OPT]Default FALSE value for [-use_aw]
[T/F  OPT]Default FALSE value for [-use_bw]
[T/F  OPT]Default FALSE value for [-use_packing_etables_always]
[T/F  OPT]Default FALSE value for [-smooth_etable]
[T/F  OPT]Default FALSE value for [-reduce_templates]
[T/F  OPT]Default FALSE value for [-gen_born]
[T/F  OPT]Default FALSE value for [-small_radii]
[STR  OPT]Default value for [-fa_lj_rep_slope] highres.
[T/F  OPT]Default FALSE value for [-dna_weights]
Starting energy table calculation
Energy table parameter set: polh_aroh  Revision: 14003 Date: 2007-04-06 11:24:40 -0700 (Fri, 06 Apr 2007)
[T/F  OPT]Default FALSE value for [-mod_hhrep]
Finished calculating energy tables.
[T/F  OPT]Default FALSE value for [-mod_etable]
[T/F  OPT]Default FALSE value for [-input_etables]
[T/F  OPT]Default FALSE value for [-output_etables]
WARNING! WARNING! Skipping bbdep, avgE, table readin.
[T/F  OPT]Default FALSE value for [-new_centroid_packing]
[REAL OPT]Default value for [-centroid_pack_weight]   2
[T/F  OPT]Default FALSE value for [-separate_centroid_pack_score]
[REAL OPT]Default value for [-cb_weight]   1
[REAL OPT]Default value for [-localstrandpair_penalty]   0
[REAL OPT]Default value for [-rsd_wt_helix]   1
[REAL OPT]Default value for [-rsd_wt_loop]   1
[REAL OPT]Default value for [-rsd_wt_strand]   1
[REAL OPT]Default value for [-strand_dist_cutoff]   6.5
[T/F  OPT]Default FALSE value for [-stretch_strand_dist_cutoff]
[REAL OPT]Default value for [-seq_sep_scale]   20
[REAL OPT]Default value for [-max_strand_dist_cutoff]   12
[T/F  OPT]Default FALSE value for [-ignore_sspair_barcode_in_score]
[T/F  OPT]Default FALSE value for [-handedness_score]
Pose::dump_pdb: .//S_00006_0000512_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0004390_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0004910_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0002513_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0003535_0.pdb
======================================================
DONE ::     1 starting structures  1.23416 cpu seconds
This process generated      0 decoys from       0 attempts
======================================================
