[REAL OPT]Default value for [-cpu_frac]   10
[REAL OPT]Default value for [-frame_rate]   10
[INT  OPT]Default value for [-cpu_run_time]  7200
command executed: /Users/rhiju/rosetta++/rosetta.mactelboincgraphics -extract -l temp.1kka__BOINC_EXCLUDENB_PERMITZERO_FIXAXIS_RNA_ABINITIO-1kka_-_1809_0.clean.out.list -paths /Users/rhiju/paths.txt -s 1kka__BOINC_EXCLUDENB_PERMITZERO_FIXAXIS_RNA_ABINITIO-1kka_-_1809_0.clean.out -enable_dna -enable_rna -fa_input
[T/F  OPT]Default FALSE value for [-no_option_display]
[T/F  OPT]Default FALSE value for [-args_file]
[STR  OPT]New value for [-paths] /Users/rhiju/paths.txt.
[T/F  OPT]Default FALSE value for [-version]
[T/F  OPT]Default FALSE value for [-score]
[T/F  OPT]Default FALSE value for [-abinitio]
[T/F  OPT]Default FALSE value for [-refine]
[T/F  OPT]Default FALSE value for [-assemble]
[T/F  OPT]Default FALSE value for [-idealize]
[T/F  OPT]Default FALSE value for [-relax]
[T/F  OPT]Default FALSE value for [-abrelax]
[T/F  OPT]Default FALSE value for [-abrelax_mode]
[T/F  OPT]Default FALSE value for [-design]
[T/F  OPT]Default FALSE value for [-dock]
[T/F  OPT]Default FALSE value for [-membrane]
[T/F  OPT]Default FALSE value for [-loops]
[T/F  OPT]Default FALSE value for [-pdbstats]
[T/F  OPT]Default FALSE value for [-interface]
[T/F  OPT]Default FALSE value for [-barcode_stats]
[T/F  OPT]Default FALSE value for [-featurize]
[T/F  OPT]Default FALSE value for [-pKa]
[T/F  OPT]Default FALSE value for [-pose_looping]
[T/F  OPT]Default FALSE value for [-domain_insertion]
[T/F  OPT]Default FALSE value for [-antibody_modeler]
[T/F  OPT]Default FALSE value for [-pose1]
[T/F  OPT]Default FALSE value for [-bk_min]
[T/F  OPT]Default FALSE value for [-adna]
[T/F  OPT]Default FALSE value for [-pdna]
[T/F  OPT]Default FALSE value for [-prna]
[T/F  OPT]Default FALSE value for [-jumping]
[T/F  OPT]Default FALSE value for [-pose_abinitio]
[T/F  OPT]Default FALSE value for [-pose_rhiju]
[T/F  OPT]New TRUE value for [-extract]
[T/F  OPT]Default FALSE value for [-jump_relax]
[T/F  OPT]Default FALSE value for [-cst_mode]
[T/F  OPT]Default FALSE value for [-mj_min]
Rosetta mode: pose1
[T/F  OPT]Default FALSE value for [-chain]
[T/F  OPT]Default FALSE value for [-protein]
[T/F  OPT]Default FALSE value for [-series]
[INT  OPT]Default value for [-nstruct]  10
[T/F  OPT]Default FALSE value for [-read_all_chains]
[T/F  OPT]Default FALSE value for [-preserve_header]
[T/F  OPT]Default FALSE value for [-use_pdb_numbering]
[T/F  OPT]Default FALSE value for [-flip_symmetric_sidechains]
[T/F  OPT]New TRUE value for [-fa_input]
[T/F  OPT]Default FALSE value for [-repack]
[T/F  OPT]Default FALSE value for [-no_optH]
[T/F  OPT]Default FALSE value for [-overwrite]
[T/F  OPT]Default FALSE value for [-no_filters]
[T/F  OPT]Default FALSE value for [-output_pdb_gz]
[T/F  OPT]Default FALSE value for [-output_silent_gz]
[T/F  OPT]Default FALSE value for [-output_scorefile_gz]
[T/F  OPT]Default FALSE value for [-pose_silent_out]
[T/F  OPT]Default FALSE value for [-sasapack_bvalues]
[T/F  OPT]Default FALSE value for [-cenlist_values]
[T/F  OPT]Default FALSE value for [-termini]
[T/F  OPT]Default FALSE value for [-Nterminus]
[T/F  OPT]Default FALSE value for [-Cterminus]
[T/F  OPT]Default FALSE value for [-use_trie]
[T/F  OPT]Default FALSE value for [-no_trie]
[T/F  OPT]Default FALSE value for [-use_conformer]
[T/F  OPT]Default FALSE value for [-use_bbind_conformer]
[T/F  OPT]Default FALSE value for [-trials_trie]
[T/F  OPT]Default FALSE value for [-no_trials_trie]
[T/F  OPT]Default FALSE value for [-pose_relax]
[T/F  OPT]Default FALSE value for [-output_interaction_graph_memory_usage]
[T/F  OPT]Default FALSE value for [-read_interaction_graph]
[T/F  OPT]Default FALSE value for [-write_interaction_graph]
[STR  OPT]Default value for [-ig_file] .
[T/F  OPT]Default FALSE value for [-packer_precompute_only]
[T/F  OPT]Default FALSE value for [-tight_memory_restrictions]
[T/F  OPT]Default FALSE value for [-lazy_ig]
[T/F  OPT]Default FALSE value for [-linmem_ig]
[T/F  OPT]Default FALSE value for [-minimalist_ig]
[T/F  OPT]Default FALSE value for [-use_sasa_pack_score]
[T/F  OPT]Default FALSE value for [-output_dot_kinemage]
[T/F  OPT]Default FALSE value for [-pack_low_temp_annealing]
[T/F  OPT]Default FALSE value for [-multi_cool_annealer]
[T/F  OPT]Default FALSE value for [-debug_annealer_design]
[T/F  OPT]Default FALSE value for [-no_his_his_pairE]
[T/F  OPT]Default FALSE value for [-silent_input]
[T/F  OPT]Default FALSE value for [-skip_scorefile_check]
[T/F  OPT]Default FALSE value for [-timer]
[T/F  OPT]Default FALSE value for [-count_attempts]
[T/F  OPT]Default FALSE value for [-status]
[T/F  OPT]Default FALSE value for [-decoy_status]
[T/F  OPT]Default FALSE value for [-ise_movie]
[T/F  OPT]Default FALSE value for [-output_all]
[T/F  OPT]Default FALSE value for [-output_chi_silent]
[T/F  OPT]Default FALSE value for [-accept_all]
[T/F  OPT]Default FALSE value for [-skip_missing_residues]
[T/F  OPT]Default FALSE value for [-use_input_sc]
[T/F  OPT]Default FALSE value for [-use_input_cb]
[STR  OPT]Default value for [-weightfile] none.
[STR  OPT]Default value for [-cst] cst.
[STR  OPT]Default value for [-dpl] dpl.
[STR  OPT]Default value for [-resfile] none.
[STR  OPT]Default value for [-equiv_resfile] none.
[T/F  OPT]Default FALSE value for [-auto_resfile]
[T/F  OPT]Default FALSE value for [-chain_inc]
WARNING:: refold_input T, input_fa T
 refolding of fullatom input not suppported
 setting refold_input F
WARNING:: input_fa T, require_start F
fullatom input not allowed when no starting structures are being input 
setting input_fa F
[T/F  OPT]Default FALSE value for [-full_filename]
[T/F  OPT]Default FALSE value for [-map_sequence]
[INT  OPT]Default value for [-max_frags]  200
[T/F  OPT]Default FALSE value for [-output_centroids]
[STR  OPT]Default value for [-protein_name_prefix] .
[STR  OPT]Default value for [-frags_name_prefix] .
[T/F  OPT]Default FALSE value for [-protein_name_prefix_homolog]
[T/F  OPT]Default FALSE value for [-use_homolog_env_stats]
[T/F  OPT]Default FALSE value for [-use_homolog_pair_stats]
[T/F  OPT]Default FALSE value for [-use_homolog_cendist_stats]
[T/F  OPT]Default FALSE value for [-use_homolog_env_stats_in_farlx]
[T/F  OPT]Default FALSE value for [-use_homolog_pair_stats_in_farlx]
[T/F  OPT]Default FALSE value for [-use_homolog_cendist_stats_in_farlx]
[T/F  OPT]Default FALSE value for [-output_hbond_info]
[T/F  OPT]Default FALSE value for [-monomer_input]
[REAL OPT]Default value for [-vdw_reweight]   1
[REAL OPT]Default value for [-env_reweight]   1
[REAL OPT]Default value for [-pair_reweight]   1
[REAL OPT]Default value for [-cb_reweight]   1
[REAL OPT]Default value for [-sheet_reweight]   1
[REAL OPT]Default value for [-ss_reweight]   1
[REAL OPT]Default value for [-hs_reweight]   1
[REAL OPT]Default value for [-rsigma_reweight]   1
[REAL OPT]Default value for [-rg_reweight]   1
[REAL OPT]Default value for [-pc_reweight]   1
[REAL OPT]Default value for [-fa_atr_reweight]   1
[REAL OPT]Default value for [-fa_rep_reweight]   1
[REAL OPT]Default value for [-fa_dun_reweight ]   1
[REAL OPT]Default value for [-fa_pair_reweight]   1
[REAL OPT]Default value for [-fa_plane_reweight]   1
[REAL OPT]Default value for [-fa_solv_reweight]   1
[REAL OPT]Default value for [-fa_ref_reweight ]   1
[REAL OPT]Default value for [-fa_pH_reweight]   1
[REAL OPT]Default value for [-fa_h2o_reweight]   1
[REAL OPT]Default value for [-fa_prob1b_reweight]   1
[REAL OPT]Default value for [-fa_gb_elec_reweigh]   1
[REAL OPT]Default value for [-hb_srbb_reweight]   1
[REAL OPT]Default value for [-hb_lrbb_reweight]   1
[REAL OPT]Default value for [-hb_sc_reweight]   1
[REAL OPT]Default value for [-chainbreak_reweight]   1
[REAL OPT]Default value for [-electron_density_reweight]   1
[REAL OPT]Default value for [-dummy_model_reweight]   1
[REAL OPT]Default value for [-saxs_model_reweight]   1
[REAL OPT]Default value for [-Wplane_total]   0
[REAL OPT]Default value for [-barcode_reweight]   1
[REAL OPT]Default value for [-barcode_energy_reweight]   1
[T/F  OPT]Default FALSE value for [-fa_max_dis]
[T/F  OPT]Default FALSE value for [-hydrogen_interaction_cutoff]
[T/F  OPT]Default FALSE value for [-find_disulf]
[T/F  OPT]Default FALSE value for [-fix_disulf]
[T/F  OPT]Default FALSE value for [-prna]
[T/F  OPT]New TRUE value for [-enable_dna]
[T/F  OPT]New TRUE value for [-enable_rna]
[T/F  OPT]Default FALSE value for [-dna_interface]
[T/F  OPT]Default FALSE value for [-enable_ligand_aa]
[T/F  OPT]Default FALSE value for [-phospho_ser]
[T/F  OPT]Default FALSE value for [-surface]
[T/F  OPT]Default FALSE value for [-loops]
[T/F  OPT]Default FALSE value for [-taboo]
[T/F  OPT]Default FALSE value for [-vary_omega]
[T/F  OPT]Default FALSE value for [-fine_hb_categories]
[T/F  OPT]Default FALSE value for [-geometric_sol]
[T/F  OPT]Default FALSE value for [-multi_chain]
[T/F  OPT]Default FALSE value for [-ex1]
[T/F  OPT]Default FALSE value for [-ex2]
[T/F  OPT]Default FALSE value for [-ex3]
[T/F  OPT]Default FALSE value for [-ex4]
[T/F  OPT]Default FALSE value for [-ex1aro]
[T/F  OPT]Default FALSE value for [-ex1aro_half]
[T/F  OPT]Default FALSE value for [-ex2aro_only]
[T/F  OPT]Default FALSE value for [-ex1aro_exposed]
[T/F  OPT]Default FALSE value for [-ex2aro_exposed]
[T/F  OPT]Default FALSE value for [-exOH]
[INT  OPT]Default value for [-extrachi_cutoff]  18
[T/F  OPT]Default FALSE value for [-rot_pert]
[T/F  OPT]Default FALSE value for [-rot_pert_input]
[T/F  OPT]Default FALSE value for [-exdb]
[T/F  OPT]Default FALSE value for [-use_electrostatic_repulsion]
[T/F  OPT]Default FALSE value for [-explicit_h2o]
[T/F  OPT]Default FALSE value for [-solvate]
[T/F  OPT]Default FALSE value for [-pH]
[T/F  OPT]Default FALSE value for [-try_both_his_tautomers]
[T/F  OPT]Default FALSE value for [-hydrate_dna]
[T/F  OPT]Default FALSE value for [-ex_dna_waters]
[T/F  OPT]Default FALSE value for [-minimize_rot]
[T/F  OPT]Default FALSE value for [-read_hetero_h2o]
[T/F  OPT]Default FALSE value for [-Wint_score_only]
[T/F  OPT]Default FALSE value for [-Wint_repack_only]
[T/F  OPT]Default FALSE value for [-ligand]
[T/F  OPT]Default FALSE value for [-enzyme_design]
[T/F  OPT]Default FALSE value for [-score_contact_flag]
[T/F  OPT]Default FALSE value for [-score_contact_weight]
[T/F  OPT]Default FALSE value for [-score_contact_threshold]
[T/F  OPT]Default FALSE value for [-scorefxn]
default centroid scorefxn:  4
default fullatom scorefxn:  12
[INT  OPT]Default value for [-run_level]  0
[T/F  OPT]Default FALSE value for [-silent]
[T/F  OPT]Default FALSE value for [-output_silent_gz]
[T/F  OPT]Default FALSE value for [-verbose]
[T/F  OPT]Default FALSE value for [-gush]
[T/F  OPT]Default FALSE value for [-yap]
[T/F  OPT]Default FALSE value for [-chat]
[T/F  OPT]Default FALSE value for [-inform]
[T/F  OPT]Default FALSE value for [-quiet]
run level:  0
[T/F  OPT]Default FALSE value for [-benchmark]
[T/F  OPT]Default FALSE value for [-debug]
[INT  OPT]Default value for [-sym_des_units]  1
[T/F  OPT]Default FALSE value for [-mj_min]
[REAL OPT]Default value for [-mod_hhrep_height]   1
[REAL OPT]Default value for [-mod_hhrep_width]   1
[REAL OPT]Default value for [-mod_hhrep_center]   2.79999995
[REAL OPT]Default value for [-mod_hhrep_exponent]   4
[REAL OPT]Default value for [-smooth_etable_ljweight]   1.15999997
[REAL OPT]Default value for [-smooth_etable_solvweight]   1.5
[STR  OPT]New value for [-s] 1kka__BOINC_EXCLUDENB_PERMITZERO_FIXAXIS_RNA_ABINITIO-1kka_-_1809_0.clean.out.
Starting structure: 1kka__BOINC_EXCLUDENB_PERMITZERO_FIXAXIS_RNA_ABINITIO-1kka_-_1809_0.clean.out
Reading /users/rhiju/rosetta_database/Rama_smooth_dyn.dat_ss_6.4
[STR  OPT]Default value for [-description_file] rosetta_description.txt.
Reading /users/rhiju/rosetta_database/phi.theta.36.HS.resmooth
Reading /users/rhiju/rosetta_database/phi.theta.36.SS.resmooth
[STR  OPT]Default value for [-atom_vdw_set] default.
[T/F  OPT]Default FALSE value for [-IUPAC]
Atom_mode set to all
Reading /users/rhiju/rosetta_database/paircutoffs
[T/F  OPT]Default FALSE value for [-interface_ds]
[T/F  OPT]Default FALSE value for [-decoystats]
set_decoystats_flag: from,to F F
[T/F  OPT]Default FALSE value for [-decoyfeatures]
[T/F  OPT]Default FALSE value for [-t32s3]
[T/F  OPT]Default FALSE value for [-evolution]
[T/F  OPT]Default FALSE value for [-evol_recomb]
[T/F  OPT]Default FALSE value for [-profile]
BOINC :: [2007- 7- 2 11:58:48:] :: mode: pose1 :: nstartnum: 1 :: number_of_output: 10 :: num_decoys: 0 :: pct_complete: 0
[T/F  OPT]Default FALSE value for [-watchdog]
[T/F  OPT]Default FALSE value for [-pose_benchmark]
[T/F  OPT]Default FALSE value for [-pose_barcode_stats]
[T/F  OPT]Default FALSE value for [-bk_min]
[T/F  OPT]Default FALSE value for [-jumping]
[T/F  OPT]Default FALSE value for [-pose_abinitio]
[T/F  OPT]Default FALSE value for [-electron_density_score]
[T/F  OPT]New TRUE value for [-extract]
[T/F  OPT]New TRUE value for [-fa_input]
[T/F  OPT]New TRUE value for [-s]
[STR  OPT]New value for [-s] 1kka__BOINC_EXCLUDENB_PERMITZERO_FIXAXIS_RNA_ABINITIO-1kka_-_1809_0.clean.out.
[STR  OPT]Default value for [-start_pdb] dummy.
read structure S_00006_0000742_0 500
read structure S_00028_0000491_0 1000
read structure S_00014_0002103_0 1500
read structure S_00014_0002964_0 2000
read structure S_00008_0002009_0 2500
read structure S_00007_0004003_0 3000
read structure S_00011_0004292_1 3500
read structure S_00028_0002453_0 4000
[T/F  OPT]Default FALSE value for [-t]
[T/F  OPT]Default FALSE value for [-all]
[T/F  OPT]New TRUE value for [-l]
[T/F  OPT]New TRUE value for [-l]
[STR  OPT]New value for [-l] temp.1kka__BOINC_EXCLUDENB_PERMITZERO_FIXAXIS_RNA_ABINITIO-1kka_-_1809_0.clean.out.list.
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
initializing full atom functions
[T/F  OPT]Default FALSE value for [-soft_rep]
[T/F  OPT]Default FALSE value for [-soft_rep_design]
[T/F  OPT]Default FALSE value for [-use_aw]
[T/F  OPT]Default FALSE value for [-use_bw]
[T/F  OPT]Default FALSE value for [-use_packing_etables_always]
[T/F  OPT]Default FALSE value for [-smooth_etable]
[T/F  OPT]Default FALSE value for [-reduce_templates]
[T/F  OPT]Default FALSE value for [-gen_born]
[T/F  OPT]Default FALSE value for [-small_radii]
[STR  OPT]Default value for [-fa_lj_rep_slope] highres.
[T/F  OPT]Default FALSE value for [-dna_weights]
Starting energy table calculation
Energy table parameter set: polh_aroh  Revision: 14003 Date: 2007-04-06 11:24:40 -0700 (Fri, 06 Apr 2007)
[T/F  OPT]Default FALSE value for [-mod_hhrep]
Finished calculating energy tables.
[T/F  OPT]Default FALSE value for [-mod_etable]
[T/F  OPT]Default FALSE value for [-input_etables]
[T/F  OPT]Default FALSE value for [-output_etables]
WARNING! WARNING! Skipping bbdep, avgE, table readin.
[T/F  OPT]Default FALSE value for [-new_centroid_packing]
[REAL OPT]Default value for [-centroid_pack_weight]   2
[T/F  OPT]Default FALSE value for [-separate_centroid_pack_score]
[REAL OPT]Default value for [-cb_weight]   1
[REAL OPT]Default value for [-localstrandpair_penalty]   0
[REAL OPT]Default value for [-rsd_wt_helix]   1
[REAL OPT]Default value for [-rsd_wt_loop]   1
[REAL OPT]Default value for [-rsd_wt_strand]   1
[REAL OPT]Default value for [-strand_dist_cutoff]   6.5
[T/F  OPT]Default FALSE value for [-stretch_strand_dist_cutoff]
[REAL OPT]Default value for [-seq_sep_scale]   20
[REAL OPT]Default value for [-max_strand_dist_cutoff]   12
[T/F  OPT]Default FALSE value for [-ignore_sspair_barcode_in_score]
[T/F  OPT]Default FALSE value for [-handedness_score]
Pose::dump_pdb: .//S_00005_0001097_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00039_0004236_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00028_0003694_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0001814_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00016_0004895_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0004009_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0001042_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00010_0001306_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00016_0000127_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0000335_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00016_0003281_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00012_0003460_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00033_0000474_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00016_0003962_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00034_0004595_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0001001_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00013_0002729_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00012_0002379_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00022_0003648_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00015_0002599_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00014_0000526_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0000195_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00022_0002515_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0002500_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00013_0001788_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0000073_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00026_0004548_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0000118_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00029_0002746_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00014_0004410_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0004942_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00012_0000309_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0004661_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00026_0004947_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00115_0003604_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0004737_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00016_0000876_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0003555_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00011_0002685_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00020_0004929_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00026_0001755_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00044_0001423_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0002063_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00017_0002740_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0003104_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0004763_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0004173_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00019_0000140_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00020_0001042_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00018_0002891_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0003031_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00058_0000095_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0004608_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00019_0000402_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00019_0001118_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0004591_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0001377_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00014_0000860_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00029_0002773_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00018_0004190_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00027_0003340_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0002072_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0004580_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00011_0003112_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00017_0001323_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0000674_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00024_0003207_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0003934_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00024_0001755_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00018_0001640_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0000775_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00010_0003663_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00028_0001584_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00021_0004668_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0002979_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00014_0002633_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00034_0001991_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00013_0001006_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00022_0000491_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00013_0000393_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0003485_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0002691_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00012_0003703_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00026_0004017_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00022_0001211_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00020_0001476_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00034_0001477_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0001704_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00021_0004996_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00038_0003812_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0004416_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0002135_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00022_0000807_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0001764_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0002569_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0001172_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00010_0000245_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00027_0002803_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00017_0002046_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00011_0001848_1.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00030_0001336_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00027_0002961_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00013_0001159_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00020_0004358_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00021_0004591_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0001927_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00017_0002098_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0002621_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00012_0004380_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0004618_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00012_0003480_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0001945_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00018_0000528_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00028_0001355_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00023_0002149_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0001892_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00013_0004943_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00127_0002341_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00013_0003444_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00021_0002434_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0003709_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00059_0003962_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0002046_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0001750_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00025_0001089_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00011_0004935_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00030_0002892_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0002466_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00020_0004561_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00043_0004409_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00021_0001854_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00032_0001627_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00039_0000361_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00066_0004809_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00027_0002028_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0000286_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00022_0004091_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0000723_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0001095_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00012_0001506_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0002327_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00015_0002952_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00015_0004766_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0003666_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00010_0001817_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00011_0003181_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00014_0001615_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00020_0002335_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00010_0000163_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00041_0004397_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0000417_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0001729_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00030_0000581_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00017_0002034_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0002944_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00014_0004629_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00014_0003803_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00013_0000336_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00016_0003669_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0003389_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0002588_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00014_0001454_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0002678_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00017_0001792_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0001286_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0002162_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00024_0004929_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0004912_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0003111_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00035_0004192_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0002566_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0002831_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00017_0002133_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0004313_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0004715_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0000653_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0003423_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00019_0000553_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0002335_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00024_0002860_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0000191_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00015_0000796_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00021_0000419_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0004689_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00018_0004565_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00013_0002964_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00060_0000530_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0003119_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00026_0002651_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00024_0000529_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00018_0003520_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00013_0001139_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0002574_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0001641_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00019_0000200_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00012_0002352_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00017_0003891_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0004564_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00013_0003197_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0001821_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00020_0004065_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0000328_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0002678_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0001138_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0001283_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0002162_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00024_0003631_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00019_0001054_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0001933_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00010_0000731_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00023_0004087_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0000084_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0000949_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0003419_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00019_0003648_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00014_0001896_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0002619_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0003368_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00023_0001207_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0004866_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00010_0001291_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00042_0004756_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0002171_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0004685_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00025_0002704_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00014_0003652_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0004553_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00017_0003528_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00026_0001951_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00034_0003782_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00025_0001052_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00024_0000114_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0000784_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00015_0002079_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00032_0002746_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00022_0004666_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0001363_1.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00024_0004419_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00090_0001077_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0001724_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00030_0002770_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00027_0002502_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0003519_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00015_0004240_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00033_0000351_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00054_0001660_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0003934_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0004622_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00022_0003898_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00015_0001216_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00010_0002188_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0002098_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0002507_1.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00036_0002015_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00010_0002163_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00017_0004628_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00034_0000330_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00026_0001617_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00065_0000675_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00027_0003816_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0003673_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00016_0004551_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0001764_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00011_0001125_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00010_0003765_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0001827_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0003880_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0004269_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00016_0004412_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00012_0004930_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00011_0004110_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00019_0003623_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0004173_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0000633_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00017_0001404_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0000242_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00012_0000834_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0003981_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0001671_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0000274_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00012_0004244_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0000141_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0001040_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0000278_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0000742_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00025_0001338_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0003135_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00037_0001806_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00079_0000181_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00020_0000585_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00015_0002035_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0001280_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00016_0004905_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00013_0003441_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00016_0003659_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00040_0003874_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00023_0001323_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0000466_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00011_0001717_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0000780_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00011_0003615_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00016_0003303_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00019_0001773_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00037_0000351_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0002943_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00014_0003367_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0000336_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00027_0003930_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00011_0001442_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00013_0004536_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0004171_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0000213_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0002047_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00021_0004045_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00023_0000955_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00051_0004036_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0001079_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0000528_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00010_0004909_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00014_0001123_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00029_0003653_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00032_0004112_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00028_0000491_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00010_0000479_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00031_0004358_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0004175_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00013_0001818_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00011_0003151_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00014_0000661_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00019_0002614_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0000480_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00016_0002035_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00049_0001224_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00030_0004463_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00011_0001982_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00018_0004631_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00023_0002330_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0000851_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00013_0002917_1.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00010_0004018_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0001216_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00010_0001620_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00038_0003536_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0004527_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00013_0003472_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0003206_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00012_0004993_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00022_0003580_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00089_0001077_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0001258_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00023_0002792_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00019_0002950_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0002367_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00016_0003647_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00022_0003321_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0002028_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0000794_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00026_0002641_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0000441_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0000578_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00023_0000380_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0002056_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0004829_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00011_0000745_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00021_0001755_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00023_0004190_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00023_0000680_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00028_0000800_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00010_0000960_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0004353_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00039_0004664_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00020_0000466_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0001035_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00022_0001362_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0004009_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00030_0003284_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00011_0004354_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00017_0002448_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00014_0003268_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00027_0001134_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00036_0004776_1.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0000203_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00019_0000489_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00014_0001144_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00014_0000733_1.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00018_0004830_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00020_0002934_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00016_0001886_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0001391_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00027_0003962_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00011_0002587_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0000269_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00023_0004126_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0003966_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00024_0002066_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00021_0003453_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00013_0002463_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00025_0000556_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0001234_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00023_0003580_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0002620_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0004212_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00033_0003910_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00010_0003934_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0004015_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00036_0000835_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0004936_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00030_0004030_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00023_0002567_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00012_0002181_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0003759_1.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0002635_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00023_0000146_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0000292_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00039_0000931_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00014_0002227_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00037_0000330_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00013_0001583_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00019_0004541_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00010_0004382_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00011_0004600_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00013_0002423_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00023_0003703_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00023_0003624_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00036_0004148_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0000118_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00038_0000213_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00036_0001980_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0001933_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00013_0002803_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00023_0004365_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00021_0002182_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0000061_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00017_0000685_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00010_0004941_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0002631_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0001301_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00015_0001394_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00022_0000617_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00027_0003467_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00014_0000935_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0001885_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00022_0000254_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00015_0003388_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0004958_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00012_0000764_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0001006_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00013_0000699_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00020_0003912_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00041_0002667_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0004677_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00016_0003932_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00011_0001949_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00051_0001587_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00017_0004397_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00013_0000525_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00033_0000127_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00016_0000166_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0000192_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00027_0002257_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00010_0001147_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00024_0002456_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00016_0000762_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00007_0000636_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00012_0000427_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0001277_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00030_0003367_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00006_0000026_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0002367_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00022_0003094_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00023_0002489_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00024_0001337_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0000312_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00031_0000791_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0002426_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00017_0003198_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00021_0004116_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00029_0001536_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00022_0003265_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00004_0001028_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0001990_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00015_0001938_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00026_0004170_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00021_0002843_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0003038_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0003248_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00016_0002161_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00055_0003604_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0004777_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0000971_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00015_0003420_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00001_0002199_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0003249_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00021_0000629_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00009_0003098_1.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0000405_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00005_0001381_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00008_0000202_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00016_0002061_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00020_0002031_1.pdb
======================================================
DONE ::     1 starting structures  15.1577 cpu seconds
This process generated      0 decoys from       0 attempts
======================================================
[REAL OPT]Default value for [-cpu_frac]   10
[REAL OPT]Default value for [-frame_rate]   10
[INT  OPT]Default value for [-cpu_run_time]  7200
command executed: /Users/rhiju/rosetta++/rosetta.mactelboincgraphics -extract -l temp.1kka__BOINC_EXCLUDENB_PERMITZERO_FIXAXIS_RNA_ABINITIO-1kka_-_1809_0.rms.clean.out.list -paths /Users/rhiju/paths.txt -s 1kka__BOINC_EXCLUDENB_PERMITZERO_FIXAXIS_RNA_ABINITIO-1kka_-_1809_0.rms.clean.out -enable_dna -enable_rna -fa_input
[T/F  OPT]Default FALSE value for [-no_option_display]
[T/F  OPT]Default FALSE value for [-args_file]
[STR  OPT]New value for [-paths] /Users/rhiju/paths.txt.
[T/F  OPT]Default FALSE value for [-version]
[T/F  OPT]Default FALSE value for [-score]
[T/F  OPT]Default FALSE value for [-abinitio]
[T/F  OPT]Default FALSE value for [-refine]
[T/F  OPT]Default FALSE value for [-assemble]
[T/F  OPT]Default FALSE value for [-idealize]
[T/F  OPT]Default FALSE value for [-relax]
[T/F  OPT]Default FALSE value for [-abrelax]
[T/F  OPT]Default FALSE value for [-abrelax_mode]
[T/F  OPT]Default FALSE value for [-design]
[T/F  OPT]Default FALSE value for [-dock]
[T/F  OPT]Default FALSE value for [-membrane]
[T/F  OPT]Default FALSE value for [-loops]
[T/F  OPT]Default FALSE value for [-pdbstats]
[T/F  OPT]Default FALSE value for [-interface]
[T/F  OPT]Default FALSE value for [-barcode_stats]
[T/F  OPT]Default FALSE value for [-featurize]
[T/F  OPT]Default FALSE value for [-pKa]
[T/F  OPT]Default FALSE value for [-pose_looping]
[T/F  OPT]Default FALSE value for [-domain_insertion]
[T/F  OPT]Default FALSE value for [-antibody_modeler]
[T/F  OPT]Default FALSE value for [-pose1]
[T/F  OPT]Default FALSE value for [-bk_min]
[T/F  OPT]Default FALSE value for [-adna]
[T/F  OPT]Default FALSE value for [-pdna]
[T/F  OPT]Default FALSE value for [-prna]
[T/F  OPT]Default FALSE value for [-jumping]
[T/F  OPT]Default FALSE value for [-pose_abinitio]
[T/F  OPT]Default FALSE value for [-pose_rhiju]
[T/F  OPT]New TRUE value for [-extract]
[T/F  OPT]Default FALSE value for [-jump_relax]
[T/F  OPT]Default FALSE value for [-cst_mode]
[T/F  OPT]Default FALSE value for [-mj_min]
Rosetta mode: pose1
[T/F  OPT]Default FALSE value for [-chain]
[T/F  OPT]Default FALSE value for [-protein]
[T/F  OPT]Default FALSE value for [-series]
[INT  OPT]Default value for [-nstruct]  10
[T/F  OPT]Default FALSE value for [-read_all_chains]
[T/F  OPT]Default FALSE value for [-preserve_header]
[T/F  OPT]Default FALSE value for [-use_pdb_numbering]
[T/F  OPT]Default FALSE value for [-flip_symmetric_sidechains]
[T/F  OPT]New TRUE value for [-fa_input]
[T/F  OPT]Default FALSE value for [-repack]
[T/F  OPT]Default FALSE value for [-no_optH]
[T/F  OPT]Default FALSE value for [-overwrite]
[T/F  OPT]Default FALSE value for [-no_filters]
[T/F  OPT]Default FALSE value for [-output_pdb_gz]
[T/F  OPT]Default FALSE value for [-output_silent_gz]
[T/F  OPT]Default FALSE value for [-output_scorefile_gz]
[T/F  OPT]Default FALSE value for [-pose_silent_out]
[T/F  OPT]Default FALSE value for [-sasapack_bvalues]
[T/F  OPT]Default FALSE value for [-cenlist_values]
[T/F  OPT]Default FALSE value for [-termini]
[T/F  OPT]Default FALSE value for [-Nterminus]
[T/F  OPT]Default FALSE value for [-Cterminus]
[T/F  OPT]Default FALSE value for [-use_trie]
[T/F  OPT]Default FALSE value for [-no_trie]
[T/F  OPT]Default FALSE value for [-use_conformer]
[T/F  OPT]Default FALSE value for [-use_bbind_conformer]
[T/F  OPT]Default FALSE value for [-trials_trie]
[T/F  OPT]Default FALSE value for [-no_trials_trie]
[T/F  OPT]Default FALSE value for [-pose_relax]
[T/F  OPT]Default FALSE value for [-output_interaction_graph_memory_usage]
[T/F  OPT]Default FALSE value for [-read_interaction_graph]
[T/F  OPT]Default FALSE value for [-write_interaction_graph]
[STR  OPT]Default value for [-ig_file] .
[T/F  OPT]Default FALSE value for [-packer_precompute_only]
[T/F  OPT]Default FALSE value for [-tight_memory_restrictions]
[T/F  OPT]Default FALSE value for [-lazy_ig]
[T/F  OPT]Default FALSE value for [-linmem_ig]
[T/F  OPT]Default FALSE value for [-minimalist_ig]
[T/F  OPT]Default FALSE value for [-use_sasa_pack_score]
[T/F  OPT]Default FALSE value for [-output_dot_kinemage]
[T/F  OPT]Default FALSE value for [-pack_low_temp_annealing]
[T/F  OPT]Default FALSE value for [-multi_cool_annealer]
[T/F  OPT]Default FALSE value for [-debug_annealer_design]
[T/F  OPT]Default FALSE value for [-no_his_his_pairE]
[T/F  OPT]Default FALSE value for [-silent_input]
[T/F  OPT]Default FALSE value for [-skip_scorefile_check]
[T/F  OPT]Default FALSE value for [-timer]
[T/F  OPT]Default FALSE value for [-count_attempts]
[T/F  OPT]Default FALSE value for [-status]
[T/F  OPT]Default FALSE value for [-decoy_status]
[T/F  OPT]Default FALSE value for [-ise_movie]
[T/F  OPT]Default FALSE value for [-output_all]
[T/F  OPT]Default FALSE value for [-output_chi_silent]
[T/F  OPT]Default FALSE value for [-accept_all]
[T/F  OPT]Default FALSE value for [-skip_missing_residues]
[T/F  OPT]Default FALSE value for [-use_input_sc]
[T/F  OPT]Default FALSE value for [-use_input_cb]
[STR  OPT]Default value for [-weightfile] none.
[STR  OPT]Default value for [-cst] cst.
[STR  OPT]Default value for [-dpl] dpl.
[STR  OPT]Default value for [-resfile] none.
[STR  OPT]Default value for [-equiv_resfile] none.
[T/F  OPT]Default FALSE value for [-auto_resfile]
[T/F  OPT]Default FALSE value for [-chain_inc]
WARNING:: refold_input T, input_fa T
 refolding of fullatom input not suppported
 setting refold_input F
WARNING:: input_fa T, require_start F
fullatom input not allowed when no starting structures are being input 
setting input_fa F
[T/F  OPT]Default FALSE value for [-full_filename]
[T/F  OPT]Default FALSE value for [-map_sequence]
[INT  OPT]Default value for [-max_frags]  200
[T/F  OPT]Default FALSE value for [-output_centroids]
[STR  OPT]Default value for [-protein_name_prefix] .
[STR  OPT]Default value for [-frags_name_prefix] .
[T/F  OPT]Default FALSE value for [-protein_name_prefix_homolog]
[T/F  OPT]Default FALSE value for [-use_homolog_env_stats]
[T/F  OPT]Default FALSE value for [-use_homolog_pair_stats]
[T/F  OPT]Default FALSE value for [-use_homolog_cendist_stats]
[T/F  OPT]Default FALSE value for [-use_homolog_env_stats_in_farlx]
[T/F  OPT]Default FALSE value for [-use_homolog_pair_stats_in_farlx]
[T/F  OPT]Default FALSE value for [-use_homolog_cendist_stats_in_farlx]
[T/F  OPT]Default FALSE value for [-output_hbond_info]
[T/F  OPT]Default FALSE value for [-monomer_input]
[REAL OPT]Default value for [-vdw_reweight]   1
[REAL OPT]Default value for [-env_reweight]   1
[REAL OPT]Default value for [-pair_reweight]   1
[REAL OPT]Default value for [-cb_reweight]   1
[REAL OPT]Default value for [-sheet_reweight]   1
[REAL OPT]Default value for [-ss_reweight]   1
[REAL OPT]Default value for [-hs_reweight]   1
[REAL OPT]Default value for [-rsigma_reweight]   1
[REAL OPT]Default value for [-rg_reweight]   1
[REAL OPT]Default value for [-pc_reweight]   1
[REAL OPT]Default value for [-fa_atr_reweight]   1
[REAL OPT]Default value for [-fa_rep_reweight]   1
[REAL OPT]Default value for [-fa_dun_reweight ]   1
[REAL OPT]Default value for [-fa_pair_reweight]   1
[REAL OPT]Default value for [-fa_plane_reweight]   1
[REAL OPT]Default value for [-fa_solv_reweight]   1
[REAL OPT]Default value for [-fa_ref_reweight ]   1
[REAL OPT]Default value for [-fa_pH_reweight]   1
[REAL OPT]Default value for [-fa_h2o_reweight]   1
[REAL OPT]Default value for [-fa_prob1b_reweight]   1
[REAL OPT]Default value for [-fa_gb_elec_reweigh]   1
[REAL OPT]Default value for [-hb_srbb_reweight]   1
[REAL OPT]Default value for [-hb_lrbb_reweight]   1
[REAL OPT]Default value for [-hb_sc_reweight]   1
[REAL OPT]Default value for [-chainbreak_reweight]   1
[REAL OPT]Default value for [-electron_density_reweight]   1
[REAL OPT]Default value for [-dummy_model_reweight]   1
[REAL OPT]Default value for [-saxs_model_reweight]   1
[REAL OPT]Default value for [-Wplane_total]   0
[REAL OPT]Default value for [-barcode_reweight]   1
[REAL OPT]Default value for [-barcode_energy_reweight]   1
[T/F  OPT]Default FALSE value for [-fa_max_dis]
[T/F  OPT]Default FALSE value for [-hydrogen_interaction_cutoff]
[T/F  OPT]Default FALSE value for [-find_disulf]
[T/F  OPT]Default FALSE value for [-fix_disulf]
[T/F  OPT]Default FALSE value for [-prna]
[T/F  OPT]New TRUE value for [-enable_dna]
[T/F  OPT]New TRUE value for [-enable_rna]
[T/F  OPT]Default FALSE value for [-dna_interface]
[T/F  OPT]Default FALSE value for [-enable_ligand_aa]
[T/F  OPT]Default FALSE value for [-phospho_ser]
[T/F  OPT]Default FALSE value for [-surface]
[T/F  OPT]Default FALSE value for [-loops]
[T/F  OPT]Default FALSE value for [-taboo]
[T/F  OPT]Default FALSE value for [-vary_omega]
[T/F  OPT]Default FALSE value for [-fine_hb_categories]
[T/F  OPT]Default FALSE value for [-geometric_sol]
[T/F  OPT]Default FALSE value for [-multi_chain]
[T/F  OPT]Default FALSE value for [-ex1]
[T/F  OPT]Default FALSE value for [-ex2]
[T/F  OPT]Default FALSE value for [-ex3]
[T/F  OPT]Default FALSE value for [-ex4]
[T/F  OPT]Default FALSE value for [-ex1aro]
[T/F  OPT]Default FALSE value for [-ex1aro_half]
[T/F  OPT]Default FALSE value for [-ex2aro_only]
[T/F  OPT]Default FALSE value for [-ex1aro_exposed]
[T/F  OPT]Default FALSE value for [-ex2aro_exposed]
[T/F  OPT]Default FALSE value for [-exOH]
[INT  OPT]Default value for [-extrachi_cutoff]  18
[T/F  OPT]Default FALSE value for [-rot_pert]
[T/F  OPT]Default FALSE value for [-rot_pert_input]
[T/F  OPT]Default FALSE value for [-exdb]
[T/F  OPT]Default FALSE value for [-use_electrostatic_repulsion]
[T/F  OPT]Default FALSE value for [-explicit_h2o]
[T/F  OPT]Default FALSE value for [-solvate]
[T/F  OPT]Default FALSE value for [-pH]
[T/F  OPT]Default FALSE value for [-try_both_his_tautomers]
[T/F  OPT]Default FALSE value for [-hydrate_dna]
[T/F  OPT]Default FALSE value for [-ex_dna_waters]
[T/F  OPT]Default FALSE value for [-minimize_rot]
[T/F  OPT]Default FALSE value for [-read_hetero_h2o]
[T/F  OPT]Default FALSE value for [-Wint_score_only]
[T/F  OPT]Default FALSE value for [-Wint_repack_only]
[T/F  OPT]Default FALSE value for [-ligand]
[T/F  OPT]Default FALSE value for [-enzyme_design]
[T/F  OPT]Default FALSE value for [-score_contact_flag]
[T/F  OPT]Default FALSE value for [-score_contact_weight]
[T/F  OPT]Default FALSE value for [-score_contact_threshold]
[T/F  OPT]Default FALSE value for [-scorefxn]
default centroid scorefxn:  4
default fullatom scorefxn:  12
[INT  OPT]Default value for [-run_level]  0
[T/F  OPT]Default FALSE value for [-silent]
[T/F  OPT]Default FALSE value for [-output_silent_gz]
[T/F  OPT]Default FALSE value for [-verbose]
[T/F  OPT]Default FALSE value for [-gush]
[T/F  OPT]Default FALSE value for [-yap]
[T/F  OPT]Default FALSE value for [-chat]
[T/F  OPT]Default FALSE value for [-inform]
[T/F  OPT]Default FALSE value for [-quiet]
run level:  0
[T/F  OPT]Default FALSE value for [-benchmark]
[T/F  OPT]Default FALSE value for [-debug]
[INT  OPT]Default value for [-sym_des_units]  1
[T/F  OPT]Default FALSE value for [-mj_min]
[REAL OPT]Default value for [-mod_hhrep_height]   1
[REAL OPT]Default value for [-mod_hhrep_width]   1
[REAL OPT]Default value for [-mod_hhrep_center]   2.79999995
[REAL OPT]Default value for [-mod_hhrep_exponent]   4
[REAL OPT]Default value for [-smooth_etable_ljweight]   1.15999997
[REAL OPT]Default value for [-smooth_etable_solvweight]   1.5
[STR  OPT]New value for [-s] 1kka__BOINC_EXCLUDENB_PERMITZERO_FIXAXIS_RNA_ABINITIO-1kka_-_1809_0.rms.clean.out.
Starting structure: 1kka__BOINC_EXCLUDENB_PERMITZERO_FIXAXIS_RNA_ABINITIO-1kka_-_1809_0.rms.clean.out
Reading /users/rhiju/rosetta_database/Rama_smooth_dyn.dat_ss_6.4
[STR  OPT]Default value for [-description_file] rosetta_description.txt.
Reading /users/rhiju/rosetta_database/phi.theta.36.HS.resmooth
Reading /users/rhiju/rosetta_database/phi.theta.36.SS.resmooth
[STR  OPT]Default value for [-atom_vdw_set] default.
[T/F  OPT]Default FALSE value for [-IUPAC]
Atom_mode set to all
Reading /users/rhiju/rosetta_database/paircutoffs
[T/F  OPT]Default FALSE value for [-interface_ds]
[T/F  OPT]Default FALSE value for [-decoystats]
set_decoystats_flag: from,to F F
[T/F  OPT]Default FALSE value for [-decoyfeatures]
[T/F  OPT]Default FALSE value for [-t32s3]
[T/F  OPT]Default FALSE value for [-evolution]
[T/F  OPT]Default FALSE value for [-evol_recomb]
[T/F  OPT]Default FALSE value for [-profile]
BOINC :: [2007- 7- 2 11:59: 4:] :: mode: pose1 :: nstartnum: 1 :: number_of_output: 10 :: num_decoys: 0 :: pct_complete: 0
[T/F  OPT]Default FALSE value for [-watchdog]
[T/F  OPT]Default FALSE value for [-pose_benchmark]
[T/F  OPT]Default FALSE value for [-pose_barcode_stats]
[T/F  OPT]Default FALSE value for [-bk_min]
[T/F  OPT]Default FALSE value for [-jumping]
[T/F  OPT]Default FALSE value for [-pose_abinitio]
[T/F  OPT]Default FALSE value for [-electron_density_score]
[T/F  OPT]New TRUE value for [-extract]
[T/F  OPT]New TRUE value for [-fa_input]
[T/F  OPT]New TRUE value for [-s]
[STR  OPT]New value for [-s] 1kka__BOINC_EXCLUDENB_PERMITZERO_FIXAXIS_RNA_ABINITIO-1kka_-_1809_0.rms.clean.out.
[STR  OPT]Default value for [-start_pdb] dummy.
read structure S_00005_0002841_0 500
[T/F  OPT]Default FALSE value for [-t]
[T/F  OPT]Default FALSE value for [-all]
[T/F  OPT]New TRUE value for [-l]
[T/F  OPT]New TRUE value for [-l]
[STR  OPT]New value for [-l] temp.1kka__BOINC_EXCLUDENB_PERMITZERO_FIXAXIS_RNA_ABINITIO-1kka_-_1809_0.rms.clean.out.list.
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
initializing full atom functions
[T/F  OPT]Default FALSE value for [-soft_rep]
[T/F  OPT]Default FALSE value for [-soft_rep_design]
[T/F  OPT]Default FALSE value for [-use_aw]
[T/F  OPT]Default FALSE value for [-use_bw]
[T/F  OPT]Default FALSE value for [-use_packing_etables_always]
[T/F  OPT]Default FALSE value for [-smooth_etable]
[T/F  OPT]Default FALSE value for [-reduce_templates]
[T/F  OPT]Default FALSE value for [-gen_born]
[T/F  OPT]Default FALSE value for [-small_radii]
[STR  OPT]Default value for [-fa_lj_rep_slope] highres.
[T/F  OPT]Default FALSE value for [-dna_weights]
Starting energy table calculation
Energy table parameter set: polh_aroh  Revision: 14003 Date: 2007-04-06 11:24:40 -0700 (Fri, 06 Apr 2007)
[T/F  OPT]Default FALSE value for [-mod_hhrep]
Finished calculating energy tables.
[T/F  OPT]Default FALSE value for [-mod_etable]
[T/F  OPT]Default FALSE value for [-input_etables]
[T/F  OPT]Default FALSE value for [-output_etables]
WARNING! WARNING! Skipping bbdep, avgE, table readin.
[T/F  OPT]Default FALSE value for [-new_centroid_packing]
[REAL OPT]Default value for [-centroid_pack_weight]   2
[T/F  OPT]Default FALSE value for [-separate_centroid_pack_score]
[REAL OPT]Default value for [-cb_weight]   1
[REAL OPT]Default value for [-localstrandpair_penalty]   0
[REAL OPT]Default value for [-rsd_wt_helix]   1
[REAL OPT]Default value for [-rsd_wt_loop]   1
[REAL OPT]Default value for [-rsd_wt_strand]   1
[REAL OPT]Default value for [-strand_dist_cutoff]   6.5
[T/F  OPT]Default FALSE value for [-stretch_strand_dist_cutoff]
[REAL OPT]Default value for [-seq_sep_scale]   20
[REAL OPT]Default value for [-max_strand_dist_cutoff]   12
[T/F  OPT]Default FALSE value for [-ignore_sspair_barcode_in_score]
[T/F  OPT]Default FALSE value for [-handedness_score]
Pose::dump_pdb: .//S_00032_0003670_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00012_0001062_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00003_0001599_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00002_0000636_0.pdb
All RNA atoms detected, using Atom_tree object
Non protein atoms detected, using Atom_tree object
Pose::dump_pdb: .//S_00033_0003974_0.pdb
======================================================
DONE ::     1 starting structures  2.19869 cpu seconds
This process generated      0 decoys from       0 attempts
======================================================
